Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912853.1_cds_XP_016462947.1_56118
CDS Infomation

[gene=LOC107786025] [db_xref=GeneID:107786025] [protein=ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like] [protein_id=XP_016462947.1] [location=join(1207..1266,1350..1584,1672..1746,2256..2386,4644..5129,5283..6050,7215..7442,8465..8944)] [gbkey=CDS]
Sequence

ATGATGCTTTCACGTATTGGCCGCTCGCTCTCTAAATCTTCTCACTCCAATATTCACAAA
GGACTTGTCTATGGTCGTGGATATGGCGTGAGGTCAGCGGCGCTGGATGAAGTGGCAGTG
CGCGGTGCGTGCATTACACGCGTCGATGGCGAGTTATGGTTTGTGAGAACCTATTTGACG
TCTATAGGAAGTGGAAAGCAGGGGTTGAGTAAGGCGTATTTGTCGGAACTCGATTCGGTT
TTTGCAAATCATAGGCTGCGGAGGTTTTTCTGTAGCGAAGGGCCAAAAAGAAGAAACTAT
GAGAACTATTATCCAAAGGACAGGAAAGAAGTTCCCAAAGGGAATAATCAAAAGGCAGAG
TCGGGCAAAGAGGAAGGTGCAGGTGAACAAGGAAATCCTCAGGAGAATTTCGTGAAGCTT
AATTACAATTTACTAACACCCTTGTTATTTATTGGGTTTATTCTGTCATCTATCCTCTTA
TCTCCTCGAGAGCAGCAGGAGATTAGCTTCCAAGAGTTCAAAAACAGGTTACTTGAAGCT
GGTCTTGTTGATAGAATTGTTGTTTCTAACAAATCTGTGGCCAAAGTTTATGTGAGGAGC
TCTGCACCCGGTCCTATTCAAATTGGTGATGACACTATTCAAGGTCCTGCAACTGGTAAA
AATGGTACAAGAAACGCAAGCCACTACAAGTATTATTTTAACATTGGGAGTGTTGAGTCA
TTCGAGGAGAAGCTTGAAGAAGTACAGGAGGCATTAGGAATAGATCCACATAATTATGTT
CCTGTTACGTATGTTGATGAGTTGAATTGGTTCCAAGAAGTGATGAGGTTTGGTCCAACA
TTGTTGATTCTTGCTGTCCTTTATTTTATGGGACGAAGAGTGCAGGGCGGAATAGGTGTT
GGAGGCCCTGGTGGAAAAGGTGCTCGTGGAATATTTAACATTGGTAAAGCACATTTCACG
AAAATGGATAAAAATGCGAAGAATAAGGTCTTCTTCAAAGATGTGGCTGGATGTGATGAG
GCAAAGCAAGAAATCATGGAGTTTGTCCACTTCCTTAAAAACCCCAAGAAATATGAGCAG
CTGGGAGCCAAAATACCCAAGGGTGCTCTTCTAGTGGGTCCTCCTGGGACTGGAAAGACA
CTTCTTGCCAAAGCTACAGCTGGAGAGTCTGGTGTACCTTTTCTTTCTATTTCTGGGTCA
GATTTTATGGAGATGTTTGTTGGTGTTGGACCAGCCAGAGTTAGGAGCTTATTTCAGGAG
GCACGACAGTGTGCACCTAGTATAATTTTCATTGATGAGATTGATGCCATTGGTCGAGCA
AGAGGGCGGGGTGGCTTTTCTGGAGGACATGATGAACGTGAAAGCACTTTAAATCAACTG
CTTGTTGAAATGGACGGTTTTGCAACCACATCAGGCGTGGTTGTACTTGCTGGCACAAAT
AGACCTGATATATTAGACAAAGCCTTGTTAAGACCCGGTCGATTTGATCGTCAAATTACC
ATAGACAAACCAGACATTAAAGGCCGTGATCAGATATTCCGGATCTACTTGAGCAAGTTG
AAACTTGACCACGACGCAGCCTTTTATTCACAAAGGCTTGCTGCTCTAACACCAGGATTT
GCCGGAGCAGACATTGCAAATGTTTGCAATGAAGCTGCTTTAATTGCCGCAAGAAATGAG
AGTACAATAATTACAATGCAACATTTTGAGTCAGCAATAGACAGGGTAATTGGAGGTCTC
GAGAAGAAGAATAAGGTCATAAGCAAGCTAGAGAGGCGGACAGTTGCCTACCATGAATCT
GGTCATGCTGTTGCTGGTTGGTTCTTGGAATACGCAGAACCATTGCTAAAAGTGACAATT
GTTCCTCGTGGTACTGCAGCCTTGGGATTTGCTCAGTATGTTCCAAACGAAAATCTTTTA
ATGACTAAGGAACAGTTATTTGATATGACATGCATGACTCTTGGAGGTCGAGCTGCTGAG
CAGGTTTTGATTGGGAAGATCTCGACTGGTGCGCAAAATGATTTGGAGAAAGTCACAAAA
ATGACGTATGCCCAGGTGGCAGTCTATGGTTTCAGTGACAAGGTTGGTCTTCTTTCTTTC
CCACAAAGAGAAGATGGATTTGAGATGTCAAAGCCTTACAGTAGCAAGACAGCAGCAATT
ATCGACAGTGAAGTCAGAGAATGGGTCTCCAAGGCTTATGAACGCACTGTTCAACTTATA
GAGGAGCACAAGGAACATGTGGCTAAAATTGCAGAGTTACTACTTGAAAAAGAGGTCCTT
CATCAAGAAGATCTGGTCCGGGTATTGGGGGAACGACCATTCAAGAGCCTTGAGCCCACG
AACTACGATAGATTCAAGCAAGGATTTGAAGAAGAGAACAAAGAAACCAAAAATAACCCC
GAAAATAAGACTGTAGAAGATAAAGGATCATCGCCTGTTGAACCTGAGGTTGTCCCGGTA
TAG

Peptide Sequence

PEP ID

XP_016462947.1
PEP Infomation

PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like [Nicotiana tabacum]
Sequence

MMLSRIGRSLSKSSHSNIHKGLVYGRGYGVRSAALDEVAVRGACITRVDGELWFVRTYLT
SIGSGKQGLSKAYLSELDSVFANHRLRRFFCSEGPKRRNYENYYPKDRKEVPKGNNQKAE
SGKEEGAGEQGNPQENFVKLNYNLLTPLLFIGFILSSILLSPREQQEISFQEFKNRLLEA
GLVDRIVVSNKSVAKVYVRSSAPGPIQIGDDTIQGPATGKNGTRNASHYKYYFNIGSVES
FEEKLEEVQEALGIDPHNYVPVTYVDELNWFQEVMRFGPTLLILAVLYFMGRRVQGGIGV
GGPGGKGARGIFNIGKAHFTKMDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEQ
LGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPARVRSLFQE
ARQCAPSIIFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFATTSGVVVLAGTN
RPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLSKLKLDHDAAFYSQRLAALTPGF
AGADIANVCNEAALIAARNESTIITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHES
GHAVAGWFLEYAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAE
QVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDGFEMSKPYSSKTAAI
IDSEVREWVSKAYERTVQLIEEHKEHVAKIAELLLEKEVLHQEDLVRVLGERPFKSLEPT
NYDRFKQGFEEENKETKNNPENKTVEDKGSSPVEPEVVPV

Transcript Sequence

Gene sequence data has not been registered.